Bacteroides xylanisolvens CL03T12C04

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides xylanisolvens CL03T12C04 is a Gram-negative, strictly anaerobic bacterium characterized by its ability to ferment xylan, a hemicellulose component abundant in plant cell walls. As a member of the Bacteroides genus, this microbe is adapted to thrive in oxygen-deprived environments, commonly found in the gastrointestinal tracts of humans and other animals. The anaerobic nature of B. xylanisolvens CL03T12C04 suggests its metabolic pathways are geared towards fermentation processes, allowing it to utilize xylan as a carbon source efficiently. This capability may play a role in the degradation of complex carbohydrates within the gut, contributing to the overall fiber digestion and promoting a balanced intestinal microbiota. The specific enzymatic mechanisms employed by B. xylanisolvens CL03T12C04 for xylan utilization have not been detailed in this dataset; however, similar species in the Bacteroides genus are known to possess a range of xylanase enzymes that facilitate the breakdown of xylan into simpler sugars. This process not only aids in nutrient acquisition for the bacterium but also provides substrates for other members of the gut microbiome, thereby fostering a symbiotic relationship within the microbial community. Understanding the functions of Bacteroides xylanisolvens CL03T12C04 may provide insights into its role in the fermentation of dietary fibers, underscoring its potential contributions to gut health and the overall metabolic processes occurring within the digestive system.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides xylanisolvens
StrainCL03T12C04

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides xylanisolvens CL03T12C04


Gene Summary

Adenine Count

1740392 bp

Thymine Count

1759741 bp

Guanine Count

1293025 bp

Cytosine Count

1262945 bp

Genome Length

6056103 bp

Protein-coding Genes

4759 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s ribosomal rnaNot AvailableNot Available+1 - 2577Not Available
5s ribosomal rnaNot AvailableNot Available+2701 - 2810Not Available
hypothetical proteinHMPREF1074_00001Not Available+3015 - 359321897.8
50s ribosomal protein l32HMPREF1074_00002Not Available+3606 - 37916824.23
3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2HMPREF1074_00003Not Available+3879 - 488637024.5
gtp-binding protein eraHMPREF1074_00004Not Available+4973 - 585433929.2
gtpase derHMPREF1074_00005Not Available+5903 - 721649537.5
hypothetical proteinHMPREF1074_00006Not Available-7355 - 811628875.0
hypothetical proteinHMPREF1074_00007Not Available+8192 - 893527408.5
hypothetical proteinHMPREF1074_00008Not Available+8932 - 970228802.0

Displaying genes 1 – 10 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites