Bacteroides thetaiotaomicron

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides thetaiotaomicron is a Gram-negative, rod-shaped bacterium that thrives as an obligate anaerobe and is classified as a chemoheterotroph, utilizing organic compounds as its energy source. This microbe is commonly found in the human gut, where it plays a crucial role in the digestion of complex carbohydrates and the synthesis of essential nutrients. As a member of the Bacteroidetes phylum, B. thetaiotaomicron is particularly adept at breaking down dietary fibers and resistant starches that are otherwise indigestible to humans. This capacity allows it to release short-chain fatty acids, which are vital for maintaining gut health and modulating the immune response. Its preference for anaerobic conditions aligns with its habitat in the intestines, where oxygen levels are low, thus enabling it to thrive in an environment that would be hostile to many other microbes. In terms of morphology, B. thetaiotaomicron is characterized by its rod shape and size, typically measuring 0.5 to 0.8 micrometers in diameter and 1.0 to 3.0 micrometers in length. The organism's Gram-negative cell wall structure, consisting of a thin peptidoglycan layer surrounded by an outer membrane, contributes to its resilience in the competitive gut environment. Beyond its role in digestion, B. thetaiotaomicron is also significant in research, particularly in the fields of microbiome studies and gut health. Its ability to interact with host immune cells and modulate inflammatory responses has garnered attention in the context of diseases such as inflammatory bowel disease (IBD) and obesity. Furthermore, the bacterium's genetic tractability makes it a valuable model organism for studying microbial interactions and metabolic pathways within the human microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides thetaiotaomicron
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides thetaiotaomicron
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides thetaiotaomicron

Accession NumberQRUV00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4524 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
arabinan endo-1%2c5-alpha-l-arabinosidaseERS852511_00001Q93HT9-368 - 229371695.8
susd family.ERS852511_00002Not Available-2329 - 413467848.8
outer membrane receptor proteins%2c mostly fe transportERS852511_00003Not Available-4160 - 7303118121.0
susd family.ERS852511_00004Not Available-7314 - 908966881.9
outer membrane receptor for ferrienterochelin and colicinsERS852511_00005Not Available-9102 - 12185116334.0
uncharacterized conserved proteinERS852511_00006Not Available-12205 - 1451483867.0
two-component system sensor histidine kinase/response regulatorERS852511_00007Not Available-14744 - 19006162660.0
endo-arabinaseERS852511_00008A5IKD4+19162 - 2070358717.1
alpha-l-arabinofuranosidaseERS852511_00009P82593+20729 - 2271174833.6
beta-xylosidaseERS852511_00010P45796+22734 - 2367835611.8

Displaying genes 1 – 10 of 10647 in total

Pathways

24 pathways

Metabolites

89 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 89 metabolites