Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Integrase | E1J03_05510 | Not Available | - | 1296036 - 1297271 | 47406.6 |
| aminodeoxychorismate synthase component i | E1J03_05515 | Not Available | + | 1297606 - 1298589 | 37387.9 |
| 4-amino-4-deoxychorismate lyase | E1J03_05520 | Not Available | + | 1298573 - 1299166 | 22676.3 |
| hypothetical protein | E1J03_05525 | Not Available | + | 1299256 - 1300398 | 43053.4 |
| mfs transporter | E1J03_05530 | Not Available | - | 1300395 - 1301591 | 43901.7 |
| phenylalanine--trna ligase subunit alpha | E1J03_05535 | Not Available | - | 1301719 - 1302753 | 38966.7 |
| duf4348 domain-containing protein | E1J03_05540 | Not Available | + | 1302865 - 1303725 | 33490.7 |
| udp-n-acetylmuramate dehydrogenase | E1J03_05545 | Not Available | + | 1303737 - 1304750 | 37589.1 |
| Gp36 | E1J03_05550 | Not Available | + | 1304759 - 1305535 | 29079.3 |
| Hypothetical protein | E1J03_05555 | Not Available | - | 1305530 - 1306174 | 24159.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
