Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Saccharomonospora
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Saccharomonospora |
| Species | Saccharomonospora viridis |
| Strain | DSM 43017 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 37 |
| Temperature range | Thermophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
705775 bp
Thymine Count
702403 bp
Guanine Count
1447224 bp
Cytosine Count
1452947 bp
Genome Length
4308349 bp
Protein-coding Genes
3897 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | SVIR_RS00005 | Not Available | + | 99 - 1892 | 65749.0 |
| dna polymerase iii subunit beta | SVIR_RS00010 | Not Available | + | 2762 - 3901 | 39421.9 |
| phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating) | SVIR_RS00015 | Not Available | + | 3934 - 4827 | 31923.9 |
| dna replication/repair protein recf | SVIR_RS00020 | Not Available | + | 4827 - 5999 | 42469.5 |
| dcia family protein | SVIR_RS00025 | Not Available | + | 6181 - 6795 | 21729.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | SVIR_RS00030 | Not Available | + | 7083 - 9047 | 72472.8 |
| dna gyrase subunit a | SVIR_RS00035 | Not Available | + | 9100 - 11625 | 93152.1 |
| duf3566 domain-containing protein | SVIR_RS00040 | Not Available | + | 11657 - 12403 | 25051.3 |
| Trna-ile | Not Available | Not Available | + | 12456 - 12529 | Not Available |
| nucleotidyltransferase domain-containing protein | SVIR_RS00050 | Not Available | - | 12785 - 13552 | 27986.8 |
Pathways
505 pathways
