Amycolatopsis regifaucium strain GY080

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis regifaucium strain GY080 is a Gram-positive, rod-shaped bacterium that exhibits spore-forming capabilities and thrives optimally at a temperature of 32.0°C under aerobic conditions. This organism belongs to the genus Amycolatopsis, which is recognized for its diverse metabolic pathways and capacity to produce various secondary metabolites, including antibiotics and other bioactive compounds. As a spore-forming microbe, A. regifaucium strain GY080 has adapted to survive in fluctuating environmental conditions, potentially enabling it to persist in ecological niches where resources may be limited or sporadic. The aerobic nature of this strain suggests that it plays a role in environments rich in oxygen, allowing it to participate in processes such as organic matter degradation and nutrient cycling. The optimal growth temperature of 32.0°C indicates that A. regifaucium strain GY080 may be particularly suited to moderate thermal environments, which could influence its ecological distribution and interactions within microbial communities. Overall, the traits of this strain suggest it may contribute significantly to the microbial diversity and functionality in its habitat, particularly in the context of organic decomposition and secondary metabolite production.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis regifaucium
Strainstrain GY080

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis regifaucium strain GY080


Gene Summary

Adenine Count

1297563 bp

Thymine Count

1308061 bp

Guanine Count

2831240 bp

Cytosine Count

2836058 bp

Genome Length

8273016 bp

Protein-coding Genes

7375 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+5 - 121Not Available
23s ribosomal rnaNot AvailableNot Available+202 - 3362Not Available
hypothetical proteinAVL48_00015Not Available-2256 - 261512787.9
lysr family transcriptional regulatorAVL48_00020Not Available+2744 - 364633012.5
16s ribosomal rnaNot AvailableNot Available+3508 - 5032Not Available
trypsinAVL48_00025Not Available-3672 - 476636875.1
lipaseAVL48_00030Not Available-4969 - 612040716.8
tetr family transcriptional regulatorAVL48_00035Not Available-6117 - 668920281.3
hypothetical proteinAVL48_00040Not Available+6808 - 765631122.5
hypothetical proteinAVL48_00045Not Available+7686 - 871135754.4

Displaying genes 1 – 10 of 14906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites