Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 5 - 121 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 202 - 3362 | Not Available |
| hypothetical protein | AVL48_00015 | Not Available | - | 2256 - 2615 | 12787.9 |
| lysr family transcriptional regulator | AVL48_00020 | Not Available | + | 2744 - 3646 | 33012.5 |
| 16s ribosomal rna | Not Available | Not Available | + | 3508 - 5032 | Not Available |
| trypsin | AVL48_00025 | Not Available | - | 3672 - 4766 | 36875.1 |
| lipase | AVL48_00030 | Not Available | - | 4969 - 6120 | 40716.8 |
| tetr family transcriptional regulator | AVL48_00035 | Not Available | - | 6117 - 6689 | 20281.3 |
| hypothetical protein | AVL48_00040 | Not Available | + | 6808 - 7656 | 31122.5 |
| hypothetical protein | AVL48_00045 | Not Available | + | 7686 - 8711 | 35754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
