Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1087756 bp
Thymine Count
1086407 bp
Guanine Count
2703248 bp
Cytosine Count
2710056 bp
Genome Length
7587467 bp
Protein-coding Genes
7376 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system atp-binding protein | SAMN05421835_1011 | Not Available | Positive | 1 - 147 | 5200.24 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1 - 94 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 116 - 1639 | 18.01 |
| uncharacterized domain 1-containing protein | SAMN05421835_1012 | Not Available | Negative | 159 - 587 | 15132.0 |
| dna polymerase i | SAMN05421835_1013 | Not Available | Positive | 638 - 3373 | 99865.4 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 1952 - 5062 | 18.01 |
| arac-type dna-binding protein | SAMN05421835_1014 | Not Available | Positive | 3432 - 3821 | 14417.4 |
| catechol 2,3-dioxygenase | SAMN05421835_1015 | Not Available | Positive | 3884 - 4315 | 16391.2 |
| hypothetical protein | SAMN05421835_1016 | Not Available | Positive | 4394 - 4987 | 21083.6 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 5165 - 5281 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.