Bacteroides fragilis str. 3725 D9 ii

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain 3725 D9 ii is a Gram-negative, rod-shaped bacterium that typically exists as single cells and thrives in anaerobic conditions, utilizing organic compounds as a source of energy. This strain exhibits optimal growth at 37.0°C, which aligns with the physiological temperature of the human body, suggesting its adaptation to a host-associated environment. As a member of the Bacteroides genus, B. fragilis plays a significant role in the human gut microbiota, contributing to the complex microbial ecosystem. Its ability to metabolize a variety of organic substrates makes it a crucial player in the breakdown of dietary fibers and other complex carbohydrates within the gastrointestinal tract. This metabolic versatility not only aids in nutrient absorption for the host but also influences the overall microbial balance and health of the gut. The anaerobic nature of B. fragilis strain 3725 D9 ii underscores its specialized niche within the host, as it thrives in oxygen-deprived environments typically found in the gut lumen. The existence of this strain within the gut microbiome reflects the intricate relationships formed among microbial communities and their host, highlighting the importance of anaerobic bacteria in maintaining gastrointestinal homeostasis and possibly influencing immune responses. Further studies on this strain may provide insights into the functional roles of Bacteroides species in health and disease within their host environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3725 D9 ii

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3725 D9 ii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3725 D9 ii


Gene Summary

Adenine Count

2105367 bp

Thymine Count

2107673 bp

Guanine Count

1527462 bp

Cytosine Count

1539539 bp

Genome Length

7280041 bp

Protein-coding Genes

6255 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1623997 - 1624040Not Available
site-specific recombinase, phage integrase familyM082_1288Not Available+1624161 - 162543850050.8
hypothetical proteinM082_1289Not Available+1625521 - 16256886707.87
hypothetical proteinM082_1290Not Available+1625730 - 162617917123.4
hypothetical proteinM082_1291Not Available-1626243 - 162743345966.5
hypothetical proteinM082_1292Not Available-1627524 - 16276645498.11
Putative n-acetylmuramoyl-l-alanine amidaseM082_1293Not Available-1627922 - 162841618167.6
hypothetical proteinM082_1294Not Available-1628862 - 162916411229.4
hypothetical proteinM082_1295Not Available-1629172 - 162944410453.4
Putative tail fiber proteinM082_1296Not Available-1629448 - 1632792117561.0

Displaying genes 1 – 10 of 6396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites