Bacteroides fragilis NCTC 9343 str. ATCC 25285

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis NCTC 9343 str. ATCC 25285 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and thrives optimally at 37.0°C. As a chemoorganotroph, this microbe utilizes organic compounds as its primary energy source, demonstrating its role in the catabolic processes within host-associated environments. Its anaerobic nature indicates that it does not require oxygen for growth, which is characteristic of many members of the Bacteroides genus, allowing them to inhabit oxygen-depleted niches within the gastrointestinal tract of various hosts. The habitat of Bacteroides fragilis NCTC 9343 str. ATCC 25285 is closely linked to its ecological role in the microbiome, where it contributes to the fermentation of complex polysaccharides and the production of short-chain fatty acids, which are essential for host metabolic functions. This strain exemplifies the intricate relationship between gut microbiota and host health, highlighting the importance of anaerobic bacteria in maintaining a balanced microbial community. The metabolic activities of Bacteroides fragilis are crucial not only for nutrient absorption but also for modulating the immune response, thereby underscoring its significance in the ecosystem of the gastrointestinal tract.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis NCTC 9343 str. ATCC 25285
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis NCTC 9343 str. ATCC 25285

Accession NumberCR626927.1

Gene Summary

Adenine Count

1477686 bp

Thymine Count

1479324 bp

Guanine Count

1125395 bp

Cytosine Count

1122735 bp

Genome Length

5205140 bp

Protein-coding Genes

4580523 genes

Non-Coding Genes

624617 genes

# of Chromosomes/Plasmids

1

Genes

No genes available for this genome.

Pathways

9 pathways

Metabolites

186 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 186 metabolites