Bacteroides fragilis str. 3-F-2 #6

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 3-F-2 #6 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and thrives in anaerobic environments. This strain exhibits a preference for an optimal growth temperature of 37.0°C, which aligns with the physiological temperature of its host-associated habitat. As a chemoorganotroph, B. fragilis str. 3-F-2 #6 derives energy from organic compounds, making it well-suited for life in complex biological systems where organic substrates are readily available. Bacteroides fragilis is known for its significant presence in the human gut microbiota, contributing to various metabolic processes and playing a role in the maintenance of gut homeostasis. The anaerobic nature of this microbe indicates its adaptation to low-oxygen environments, such as the intestinal tract, where it participates in the fermentation of dietary fibers and other complex carbohydrates. Understanding the ecological role of Bacteroides fragilis str. 3-F-2 #6 provides valuable insights into its function in the microbiome, particularly regarding its contributions to nutrient metabolism and the potential modulation of host immune responses. The study of this strain may reveal further aspects of microbial interactions within the gut ecosystem, emphasizing the importance of anaerobic bacteria in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3-F-2 #6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3-F-2 #6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3-F-2 #6


Gene Summary

Adenine Count

1506949 bp

Thymine Count

1506379 bp

Guanine Count

1146633 bp

Cytosine Count

1140498 bp

Genome Length

5300459 bp

Protein-coding Genes

4786 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative phage head tail adapterM144_2354Not Available+2656302 - 265666713916.6
hypothetical proteinM144_2355Not Available+2656711 - 26568997104.86
hypothetical proteinM144_2356Not Available-2656949 - 26571045366.65
hypothetical proteinM144_2357Not Available+2657376 - 265782216785.9
AttlNot AvailableNot Available+2657732 - 2657743Not Available
3_nc_021794: site specific recombinase, tyrosineM144_2358Not Available+2657836 - 265883138817.6
hypothetical proteinM144_2359Not Available+2658858 - 26590075920.42
hypothetical proteinM144_2360Not Available+2659337 - 26595739110.68
Putative dna methylaseM144_2361Not Available+2659593 - 266059738425.4
Hypothetical proteinM144_2362Not Available+2660791 - 266128818917.4

Displaying genes 1 – 10 of 4913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites