Bacteroides fragilis str. 2-F-2 #4

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 2-F-2 #4 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and thrives optimally at a temperature of 37.0°C. This microbe is classified as a chemoorganotroph, indicating its reliance on organic compounds for energy. Bacteroides fragilis str. 2-F-2 #4 is strictly anaerobic, meaning it does not require oxygen for growth and may even be inhibited by its presence. This strain is associated with host environments, suggesting a symbiotic or commensal relationship with its host organisms, which may include various mammals. The ability of Bacteroides fragilis to thrive in anaerobic conditions within the host may contribute to its ecological niche in the gastrointestinal tract, where it plays a role in the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are beneficial for host metabolism. The unique adaptation of Bacteroides fragilis str. 2-F-2 #4 to anaerobic conditions and its preference for organic substrates highlight its significance in the complex microbial communities of the host, potentially influencing both nutrient absorption and the overall health of the host organism. Understanding the metabolic pathways and interactions of this strain within the host could provide insights into its role in gut microbiome dynamics and health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain2-F-2 #4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 2-F-2 #4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 2-F-2 #4


Gene Summary

Adenine Count

1575449 bp

Thymine Count

1580463 bp

Guanine Count

1211202 bp

Cytosine Count

1209474 bp

Genome Length

5576588 bp

Protein-coding Genes

5124 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+233 - 340Not Available
hypothetical proteinM076_0001Not Available+453 - 122029692.8
5s ribosomal rnaNot AvailableNot Available+963 - 1070Not Available
leucine--trna ligaseM076_0002Not Available+1536 - 4367107902.0
hypothetical proteinM076_0003Not Available+4412 - 528132519.2
non-canonical purine ntp pyrophosphatase, rdgb/ham1 familyM076_0004Not Available+5292 - 587621635.6
hypothetical proteinM076_0005Not Available+6143 - 62775124.23
hypothetical proteinM076_0006Not Available+6295 - 64355515.72
quinolinate synthetase complex, a subunitM076_0007Not Available-6467 - 745936387.0
spou rrna methylase family proteinM076_0008Not Available+7916 - 844319713.8

Displaying genes 1 – 10 of 5216 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites