Bacteroides fragilis str. J-143-4

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. J-143-4 is a Gram-negative, rod-shaped anaerobic bacterium that primarily exists in a single-cell arrangement. This strain is adapted to a host-associated habitat, indicating its presence in various biological environments, likely within the gastrointestinal tract of mammals. As a chemoorganotroph, B. fragilis str. J-143-4 utilizes organic compounds as its energy source, reflecting its ability to thrive in nutrient-rich environments typically found in association with host organisms. The optimal growth temperature for this strain is approximately 37.0°C, which corresponds to the physiological temperature of warm-blooded hosts, further underscoring its adaptation to a host-associated lifestyle. B. fragilis is notable for its metabolic versatility, which enables it to exploit a range of organic substrates, contributing to its survival and colonization in the complex microbial communities of the gut. The ecological role of Bacteroides fragilis str. J-143-4 may extend beyond mere commensalism, as its metabolic activities can influence the host's nutrient absorption and immune responses. This interplay highlights the potential significance of this strain in maintaining gut homeostasis and its contributions to the overall microbiome dynamics. Understanding the specific traits of B. fragilis str. J-143-4 can enhance our knowledge of microbial interactions within host environments and their implications for health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainJ-143-4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. J-143-4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. J-143-4


Gene Summary

Adenine Count

1569177 bp

Thymine Count

1570675 bp

Guanine Count

1194027 bp

Cytosine Count

1187508 bp

Genome Length

5521387 bp

Protein-coding Genes

5056 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+85 - 1599Not Available
putative atp/gtp-binding proteinM067_0001Not Available+712 - 178841224.9
leucine--trna ligaseM067_0002Not Available+2104 - 4935107957.0
hypothetical proteinM067_0003Not Available+4980 - 584932519.2
non-canonical purine ntp pyrophosphatase, rdgb/ham1 familyM067_0004Not Available+5860 - 644421621.6
quinolinate synthetase complex, a subunitM067_0005Not Available-7035 - 802736387.0
spou rrna methylase family proteinM067_0006Not Available+8484 - 901119713.8
outer membrane efflux family proteinM067_0007Not Available+9244 - 1063553947.1
lanthionine synthetase c-like family proteinM067_0008Not Available+10628 - 1159937717.6
5s ribosomal rnaNot AvailableNot Available+11206 - 11313Not Available

Displaying genes 1 – 10 of 5161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites