Bacteroides fragilis str. DS-208

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. DS-208 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a chemoorganotroph, deriving energy primarily from organic compounds, and is adapted to anaerobic environments, making it a strict anaerobe. The optimal growth temperature for B. fragilis str. DS-208 is 37.0°C, aligning with the physiological conditions found within mammalian hosts, where it is commonly associated. Bacteroides fragilis is well-known for its role in the human gut microbiome, contributing to the complex interactions within host-associated microbial communities. Given its anaerobic nature and reliance on organic substrates, this strain is likely to play a crucial role in the fermentation of complex carbohydrates, thereby influencing nutrient availability and metabolic processes within the gut environment. The presence of B. fragilis str. DS-208 in host-associated habitats underscores its potential contributions to digestive health and microbial homeostasis. Overall, the characteristics of Bacteroides fragilis str. DS-208 highlight its adaptation to a host-associated, anaerobic lifestyle, suggesting that it may be integral to the maintenance of gut health through its metabolic activities and interactions with other microorganisms in the intestinal ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainDS-208

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. DS-208
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. DS-208


Gene Summary

Adenine Count

1427439 bp

Thymine Count

1423256 bp

Guanine Count

1097719 bp

Cytosine Count

1102885 bp

Genome Length

5051299 bp

Protein-coding Genes

4562 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Major capsid proteinM072_4448Not Available+4811971 - 481307440308.6
Head-tail joining proteinM072_4449Not Available+4813138 - 481343411415.7
Head-tail adaptor gp7M072_4450Not Available+4813434 - 481375112142.7
hypothetical proteinM072_4451Not Available+4813744 - 481420516860.3
hypothetical proteinM072_4452Not Available+4814202 - 481459714604.1
Major tail proteinM072_4453Not Available+4814612 - 481510017095.2
hypothetical proteinM072_4454Not Available+4815159 - 481550013185.1
hypothetical proteinM072_4455Not Available+4815539 - 481579610152.2
1_nc_021795: putative tail length tape measure proteinM072_4456Not Available+4815789 - 481799980494.7
Hypothetical proteinM072_4457Not Available+4817999 - 482006278913.0

Displaying genes 1 – 10 of 4673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites