Bacteroides xylanisolvens strain NLAE-zl-G339

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides xylanisolvens strain NLAE-zl-G339 is a Gram-negative, anaerobic bacterium known for its ability to ferment xylan, a hemicellulosic polysaccharide found in plant cell walls. This strain thrives in anaerobic environments, highlighting its adaptation to ecological niches such as the human gut, where oxygen levels are low. As a member of the Bacteroides genus, this strain is likely involved in the breakdown of complex carbohydrates, contributing to the fermentation processes within the intestinal microbiome. The anaerobic nature of Bacteroides xylanisolvens strain NLAE-zl-G339 suggests its metabolic pathways are optimized for environments devoid of oxygen, which may influence its interactions with other gut microorganisms and its role in the degradation of dietary fibers. Furthermore, the ability to utilize xylan could play a significant role in enhancing the overall efficiency of nutrient absorption and energy extraction from plant-based diets in host organisms. Understanding the specific metabolic capabilities of Bacteroides xylanisolvens strain NLAE-zl-G339 may provide insights into its contributions to gut health and its potential influence on the fermentation of dietary fibers. This could facilitate further studies aimed at exploring the relationships between dietary habits, gut microbiota composition, and overall health outcomes, particularly in relation to fiber-rich diets.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides xylanisolvens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides xylanisolvens strain NLAE-zl-G339


Gene Summary

Adenine Count

1767470 bp

Thymine Count

1803791 bp

Guanine Count

1298198 bp

Cytosine Count

1262169 bp

Genome Length

6131743 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rna . bacterial ssuNot AvailableNot Available+5 - 105918.01
5s ribosomal rna . bacterial tsuNot AvailableNot Available+60 - 17018.01
5s ribosomal rna . bacterial tsuNot AvailableNot Available+165 - 27518.01
chemotaxis protein motbSAMN04487924_1011Not Available-386 - 122831734.3
xtp/ditp diphosphohydrolaseSAMN04487924_1012Not Available-1260 - 184421507.5
uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domainsSAMN04487924_1013Not Available-1892 - 280934201.3
leucyl-trna synthetaseSAMN04487924_1014Not Available-2934 - 5768108792.0
alpha-l-rhamnosidaseSAMN04487924_1015Not Available+6504 - 907495217.9
hepn domain-containing proteinSAMN04487924_1016Not Available-9208 - 1010435411.3
pd-(d/e)xk nuclease superfamily proteinSAMN04487924_1017Not Available-10142 - 1189368451.3

Displaying genes 1 – 10 of 4897 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites