Bacteroides finegoldii CL09T03C10

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides finegoldii CL09T03C10 is a Gram-negative, anaerobic bacterium that is part of the diverse Bacteroides genus, which is known for its role in the human gut microbiome. As an anaerobe, B. finegoldii CL09T03C10 thrives in environments devoid of oxygen, which is characteristic of many species within the Bacteroides group. This metabolic adaptation allows it to perform fermentation processes, utilizing various substrates typically found in the gastrointestinal tract. The Gram-negative nature of B. finegoldii CL09T03C10 indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a hallmark of this bacterial classification. Such structural features often confer resistance to certain antibiotics and influence the bacterium's interactions within its microbial community. While detailed ecological roles and specific interactions with host organisms have not been elucidated, the presence of Bacteroides species, including B. finegoldii CL09T03C10, in the gut microbiome is generally associated with the breakdown of complex carbohydrates and the maintenance of gut health. The metabolic products from these processes, such as short-chain fatty acids, may contribute to gut homeostasis and have implications for host metabolism. Additionally, the ability to thrive in anaerobic conditions suggests a potential adaptability to various niches within the gut environment, highlighting the ecological versatility of this species within the complex interplay of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides finegoldii
StrainCL09T03C10

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides finegoldii CL09T03C10


Gene Summary

Adenine Count

1446381 bp

Thymine Count

1485900 bp

Guanine Count

1105469 bp

Cytosine Count

1059928 bp

Genome Length

5097678 bp

Protein-coding Genes

4157 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHMPREF1057_04149Not Available+4995289 - 499568114509.7
hypothetical proteinHMPREF1057_04150Not Available-4995765 - 499667933499.4
hypothetical proteinHMPREF1057_04151Not Available-4996683 - 499790645289.1
glutamate decarboxylaseHMPREF1057_04152Not Available+4998096 - 499953854739.7
glutaminaseHMPREF1057_04153Not Available+4999546 - 500051134249.1
hypothetical proteinHMPREF1057_04154Not Available+5000690 - 500233958917.6
Trna-pheNot AvailableNot Available+5002525 - 5002600Not Available
hypothetical proteinHMPREF1057_04155Not Available+5003054 - 50032126047.41
xylosidase/arabinosidaseHMPREF1057_04156Not Available-5003628 - 500459036608.8
hypothetical proteinHMPREF1057_04157Not Available-5004636 - 500575442570.3

Displaying genes 4241 – 4250 of 4297 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

193 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 1–10 of 193 metabolites