Bacteroides finegoldii DSM 17565

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides finegoldii DSM 17565 is a Gram-negative, rod-shaped bacterium that thrives optimally at anaerobic conditions and is classified as a Heterotroph. This microbe predominantly resides in the human gastrointestinal tract, particularly in the colon, where it plays a crucial role in gut health and metabolism. As an obligate anaerobe, B. finegoldii thrives in environments devoid of oxygen, using fermentation processes to break down complex carbohydrates and contribute to the overall microbial community. Belonging to the Bacteroides genus, this bacterium is known for its diverse metabolic capabilities, allowing it to utilize a wide array of substrates for energy and growth. Its heterotrophic nature signifies that it derives its nutrients from organic matter, including dietary fibers and polysaccharides, which it ferments to produce short-chain fatty acids (SCFAs). These SCFAs, particularly butyrate, are essential for maintaining intestinal health, supporting colonic cell function, and modulating the immune system. Research has shown that Bacteroides finegoldii may also play a role in various health conditions and diseases, reflecting its importance in the human microbiome. Alterations in the levels of this bacterium, along with other gut bacteria, have been associated with obesity, inflammatory bowel disease, and other metabolic disorders. Its presence is a marker of healthy gut flora, and it is routinely studied for its potential to influence therapeutic approaches in gastrointestinal health. Moreover, B. finegoldii is useful in biotechnological applications, such as the production of bioactive compounds and enzymes, highlighting its versatile nature in microbial ecology and industrial uses.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides finegoldii
StrainDSM 17565

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides finegoldii DSM 17565


Gene Summary

Adenine Count

1397738 bp

Thymine Count

1388209 bp

Guanine Count

1047634 bp

Cytosine Count

1048320 bp

Genome Length

4881901 bp

Protein-coding Genes

4485 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+1 - 103Not Available
hypothetical proteinBACFIN_04700Not Available+72 - 2246037.34
5s ribosomal rnaNot AvailableNot Available+87 - 196Not Available
succinate dehydrogenase/fumarate reductase iron-sulfur subunitBACFIN_04701Not Available-331 - 108627423.2
23s ribosomal rnaNot AvailableNot Available+1835 - 4711Not Available
succinate dehydrogenase or fumarate reductase, flavoprotein subunitBACFIN_04702P08065-1123 - 310273282.2
succinate dehydrogenase cytochrome b subunit, b558 familyBACFIN_04703Not Available-3140 - 384426313.8
5s ribosomal rnaNot AvailableNot Available+4801 - 4910Not Available
transcriptional regulator, arac familyBACFIN_04705Not Available-3965 - 496639076.0
glycosyl hydrolase, family 18BACFIN_04704Not Available+4952 - 596838123.2

Displaying genes 1 – 10 of 3887 in total

Metabolites

354 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 354 metabolites