Bacteroides fragilis CL07T12C05

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis CL07T12C05 is a Gram-negative, rod-shaped bacterium that typically exists as single cells within host-associated environments. This strain is optimally active at a temperature of 37.0°C, which aligns with the physiological conditions found within mammalian hosts. As a chemoorganotroph, B. fragilis CL07T12C05 derives its energy from organic compounds, a trait that reflects its adaptation to nutrient-rich environments typically present in the gastrointestinal tract. This organism is classified as an anaerobe, indicating its growth and metabolic activities occur in the absence of oxygen. The anaerobic nature of B. fragilis CL07T12C05 suggests it plays a role in maintaining the delicate balance of microbial communities in the host, particularly in the gut, where oxygen levels are low. The ability to thrive in anaerobic conditions and utilize organic substrates is significant for its ecological niche, potentially contributing to the degradation of complex carbohydrates and the production of short-chain fatty acids, which are beneficial for host health. Understanding the specific traits of Bacteroides fragilis CL07T12C05 can provide insights into its role in the microbiome, particularly regarding its interactions with host metabolism and immune functions. Further investigation into this strain could elucidate its contributions to gut homeostasis and its potential implications for health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainCL07T12C05

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis CL07T12C05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis CL07T12C05


Gene Summary

Adenine Count

1515305 bp

Thymine Count

1546239 bp

Guanine Count

1204721 bp

Cytosine Count

1163962 bp

Genome Length

5430227 bp

Protein-coding Genes

4596 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+2941467 - 2941478Not Available
3_nc_021794: site specific recombinase, tyrosineHMPREF1056_02489Not Available+2941612 - 294260738817.6
hypothetical proteinHMPREF1056_02490Not Available+2942634 - 29427835920.42
hypothetical proteinHMPREF1056_02491Not Available-2942767 - 29429617083.61
hypothetical proteinHMPREF1056_02492Not Available+2942986 - 29430844065.99
hypothetical proteinHMPREF1056_02493Not Available+2943113 - 29433499110.68
hypothetical proteinHMPREF1056_02494Not Available+2943360 - 29436149644.52
hypothetical proteinHMPREF1056_02495Not Available+2943630 - 294394711682.1
hypothetical proteinHMPREF1056_02496Not Available+2943967 - 29441406678.01
hypothetical proteinHMPREF1056_02497Not Available+2944163 - 29443156026.47

Displaying genes 1 – 10 of 1212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

70 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001330N-acetyl-D-hexosamineC8H15NO6Chemical structure of N-acetyl-D-hexosamineNot available
Average221.209Da
Monoisotopic221.089937207Da
BASm0001586ethyl (R)-3-hydroxybutanoateC6H12O3Chemical structure of ethyl (R)-3-hydroxybutanoateNot available
Average132.159Da
Monoisotopic132.078644246Da
BASm0001680methanophenazineC37H50N2OChemical structure of methanophenazineNot available
Average538.82Da
Monoisotopic538.3923142Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 70 metabolites