Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | HMPREF1065_00028 | Not Available | - | 28512 - 29285 | 27547.5 |
| thiamine-phosphate pyrophosphorylase | HMPREF1065_00029 | Not Available | - | 29303 - 29929 | 23201.0 |
| thiamine biosynthesis protein this | HMPREF1065_00030 | Not Available | - | 29919 - 30119 | 7169.82 |
| superoxide dismutase | HMPREF1065_00031 | Not Available | - | 30507 - 31124 | 23289.6 |
| hypothetical protein | HMPREF1065_00032 | Not Available | + | 31233 - 33623 | 91441.8 |
| carboxynorspermidine decarboxylase | HMPREF1065_00033 | Not Available | + | 33651 - 34814 | 44279.9 |
| Trna-gly | Not Available | Not Available | + | 34989 - 35061 | Not Available |
| Trna-leu | Not Available | Not Available | + | 35109 - 35192 | Not Available |
| Trna-leu | Not Available | Not Available | + | 35214 - 35300 | Not Available |
| Trna-gly | Not Available | Not Available | + | 35314 - 35386 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

