Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | HMPREF1065_00018 | Not Available | - | 20170 - 21087 | 33387.5 |
| hypothetical protein | HMPREF1065_00019 | Not Available | - | 21272 - 21880 | 22885.6 |
| hypothetical protein | HMPREF1065_00020 | Not Available | - | 21877 - 22041 | 6477.33 |
| hypothetical protein | HMPREF1065_00021 | Not Available | + | 22099 - 22452 | 12903.2 |
| hypothetical protein | HMPREF1065_00022 | Not Available | + | 22465 - 23589 | 43132.7 |
| hypothetical protein | HMPREF1065_00023 | Not Available | - | 23703 - 24434 | 26927.7 |
| thiazole biosynthesis protein thih | HMPREF1065_00024 | Not Available | - | 24472 - 25602 | 43564.4 |
| hypothetical protein | HMPREF1065_00025 | Not Available | - | 25694 - 26266 | 21450.7 |
| hypothetical protein | HMPREF1065_00026 | Not Available | - | 26263 - 26790 | 19952.4 |
| phosphomethylpyrimidine synthase | HMPREF1065_00027 | Not Available | - | 26803 - 28500 | 63322.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

