Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00077 | Not Available | - | 95614 - 97734 | 79996.2 |
| inner membrane protein oxaa | HMPREF1065_00078 | Not Available | - | 97963 - 99831 | 71007.9 |
| ctp synthase | HMPREF1065_00079 | Not Available | - | 99871 - 101469 | 60096.4 |
| hypothetical protein | HMPREF1065_00080 | Not Available | + | 101631 - 103073 | 55238.8 |
| udp-n-acetylglucosamine 2-epimerase | HMPREF1065_00081 | Not Available | - | 103187 - 104275 | 40299.0 |
| hypothetical protein | HMPREF1065_00082 | Not Available | + | 104359 - 104973 | 22186.8 |
| sigma-70 family rna polymerase sigma factor | HMPREF1065_00083 | Not Available | + | 105132 - 105635 | 19667.6 |
| hypothetical protein | HMPREF1065_00084 | Not Available | + | 105824 - 107599 | 66774.8 |
| hypothetical protein | HMPREF1065_00085 | Not Available | + | 107723 - 108607 | 33154.2 |
| monofunctional biosynthetic peptidoglycan transglycosylase | HMPREF1065_00086 | Not Available | - | 108579 - 109301 | 27959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

