Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00919 | Not Available | Positive | 1042891 - 1043445 | 20438.9 |
| hypothetical protein | HMPREF1065_00920 | Not Available | Positive | 1043460 - 1044278 | 30941.9 |
| hypothetical protein | HMPREF1065_00921 | Not Available | Positive | 1044275 - 1045003 | 27188.0 |
| hypothetical protein | HMPREF1065_00922 | Not Available | Positive | 1045008 - 1046225 | 45942.2 |
| hypothetical protein | HMPREF1065_00923 | Not Available | Positive | 1046253 - 1047479 | 43573.5 |
| gdp-mannose 4,6-dehydratase | HMPREF1065_00924 | Not Available | Positive | 1047506 - 1048585 | 40921.0 |
| hypothetical protein | HMPREF1065_00925 | Not Available | Positive | 1048605 - 1049687 | 41077.3 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMPREF1065_00926 | Not Available | Positive | 1049702 - 1050745 | 39347.3 |
| hypothetical protein | HMPREF1065_00927 | Not Available | Positive | 1050749 - 1051177 | 17011.3 |
| hypothetical protein | HMPREF1065_00928 | Not Available | Negative | 1051339 - 1053483 | 81992.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

