Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00899 | Not Available | Negative | 1021264 - 1021692 | 15594.9 |
| hypothetical protein | HMPREF1065_00900 | Not Available | Positive | 1021941 - 1022171 | 8949.8 |
| hypothetical protein | HMPREF1065_00901 | Not Available | Negative | 1022322 - 1024700 | 89870.3 |
| hypothetical protein | HMPREF1065_00902 | Not Available | Positive | 1025374 - 1025874 | 18975.6 |
| glucose-1-phosphate thymidylyltransferase | HMPREF1065_00903 | Not Available | Positive | 1026098 - 1026988 | 33116.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF1065_00904 | Not Available | Positive | 1026985 - 1027554 | 21991.1 |
| dtdp-4-dehydrorhamnose reductase | HMPREF1065_00905 | Not Available | Positive | 1027561 - 1028424 | 32478.7 |
| dtdp-glucose 4,6-dehydratase | HMPREF1065_00906 | Not Available | Positive | 1028421 - 1029485 | 40947.7 |
| hypothetical protein | HMPREF1065_00907 | Not Available | Positive | 1029679 - 1031217 | 58567.1 |
| hypothetical protein | HMPREF1065_00908 | Not Available | Positive | 1031214 - 1031711 | 18530.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

