Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00810 | Not Available | Negative | 910416 - 910589 | 6352.79 |
| hypothetical protein | HMPREF1065_00811 | Not Available | Positive | 910830 - 911612 | 30077.9 |
| hypothetical protein | HMPREF1065_00812 | Not Available | Positive | 911590 - 911973 | 14756.1 |
| lactate permease (lctp) family transporter | HMPREF1065_00813 | Not Available | Negative | 912009 - 913508 | 53132.8 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | HMPREF1065_00814 | Not Available | Negative | 913770 - 915056 | 46258.8 |
| hypothetical protein | HMPREF1065_00815 | Not Available | Negative | 915324 - 915818 | 18184.4 |
| hypothetical protein | HMPREF1065_00816 | Not Available | Negative | 915815 - 917974 | 81863.4 |
| hypothetical protein | HMPREF1065_00817 | Not Available | Negative | 918023 - 918385 | 13907.0 |
| hypothetical protein | HMPREF1065_00818 | Not Available | Negative | 918519 - 919538 | 36140.1 |
| tigr00153 family protein | HMPREF1065_00819 | Not Available | Negative | 919555 - 920202 | 25095.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

