Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00781 | Not Available | Negative | 865150 - 866412 | 47074.9 |
| hypothetical protein | HMPREF1065_00782 | Not Available | Negative | 866423 - 866824 | 15397.0 |
| sigma-70 family rna polymerase sigma factor | HMPREF1065_00783 | Not Available | Negative | 867046 - 867906 | 32805.3 |
| protease do | HMPREF1065_00784 | Not Available | Negative | 868412 - 869935 | 53867.6 |
| hypothetical protein | HMPREF1065_00785 | Not Available | Negative | 870256 - 870843 | 21284.3 |
| hypothetical protein | HMPREF1065_00786 | Not Available | Negative | 870939 - 871775 | 32672.3 |
| hypothetical protein | HMPREF1065_00787 | Not Available | Positive | 872091 - 875228 | 119919.0 |
| hypothetical protein | HMPREF1065_00788 | Not Available | Negative | 875689 - 877029 | 49812.6 |
| hypothetical protein | HMPREF1065_00789 | Not Available | Negative | 877038 - 878378 | 49806.1 |
| hypothetical protein | HMPREF1065_00790 | Not Available | Negative | 878436 - 881192 | 104354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

