Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 72327 - 75213 | Not Available |
| hypothetical protein | HMPREF1065_00061 | Not Available | + | 72752 - 73861 | 42525.3 |
| hypothetical protein | HMPREF1065_00062 | Not Available | + | 73914 - 74927 | 38646.2 |
| hypothetical protein | HMPREF1065_00063 | Not Available | + | 74944 - 76116 | 45321.8 |
| 5s ribosomal rna | Not Available | Not Available | + | 75294 - 75403 | Not Available |
| wecb/taga/cpsf family glycosyl transferase | HMPREF1065_00064 | Not Available | + | 76149 - 76862 | 27665.0 |
| hypothetical protein | HMPREF1065_00065 | Not Available | - | 76766 - 76996 | 9075.28 |
| hypothetical protein | HMPREF1065_00066 | Not Available | + | 77003 - 77857 | 31823.0 |
| hypothetical protein | HMPREF1065_00067 | Not Available | - | 77964 - 79124 | 44347.2 |
| hypothetical protein | HMPREF1065_00068 | Not Available | - | 79305 - 81410 | 79165.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

