Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | HMPREF1065_00721 | Not Available | + | 797422 - 798819 | 50026.3 |
| hypothetical protein | HMPREF1065_00722 | Not Available | + | 798897 - 801086 | 82283.0 |
| dethiobiotin synthase | HMPREF1065_00723 | Not Available | - | 801203 - 801847 | 24299.9 |
| biotin biosynthesis protein bioc | HMPREF1065_00724 | Not Available | - | 801862 - 802617 | 28879.0 |
| hypothetical protein | HMPREF1065_00725 | Not Available | - | 802629 - 803282 | 25023.1 |
| 8-amino-7-oxononanoate synthase | HMPREF1065_00726 | Not Available | - | 803279 - 804430 | 43084.3 |
| biotin synthase | HMPREF1065_00727 | Not Available | - | 804458 - 805729 | 47851.3 |
| biotin synthase | HMPREF1065_00728 | Not Available | - | 805768 - 806727 | 35644.1 |
| hypothetical protein | HMPREF1065_00729 | Not Available | + | 806762 - 807226 | 18203.3 |
| hypothetical protein | HMPREF1065_00730 | Not Available | - | 807254 - 808666 | 53722.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

