Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase, type ii | HMPREF1065_00711 | Not Available | - | 785607 - 786665 | 37861.8 |
| anaerobic c4-dicarboxylate uptake (dcu) family transporter | HMPREF1065_00712 | Not Available | - | 786858 - 788156 | 45850.3 |
| hypothetical protein | HMPREF1065_00713 | Not Available | + | 788339 - 789289 | 34275.4 |
| solute:sodium symporter (sss) family transporter | HMPREF1065_00714 | Not Available | - | 789587 - 791020 | 52161.3 |
| hypothetical protein | HMPREF1065_00715 | Not Available | - | 791034 - 791966 | 33979.5 |
| hypothetical protein | HMPREF1065_00716 | Not Available | - | 792129 - 793577 | 55004.9 |
| diaminopimelate epimerase | HMPREF1065_00717 | Not Available | + | 793988 - 794803 | 29687.8 |
| ll-diaminopimelate aminotransferase | HMPREF1065_00718 | Not Available | + | 794850 - 796079 | 45797.8 |
| hypothetical protein | HMPREF1065_00719 | Not Available | + | 796179 - 796904 | 25982.1 |
| hypothetical protein | HMPREF1065_00720 | Not Available | + | 796996 - 797352 | 13522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

