Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mtaa/cmua family methyltransferase | HMPREF1065_00644 | Not Available | - | 694124 - 695134 | 36600.4 |
| hypothetical protein | HMPREF1065_00645 | Not Available | - | 695284 - 696564 | 48927.5 |
| hypothetical protein | HMPREF1065_00646 | Not Available | - | 696579 - 698354 | 67451.7 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_00647 | Not Available | - | 698378 - 701536 | 116600.0 |
| hypothetical protein | HMPREF1065_00648 | Not Available | - | 702081 - 703877 | 68142.1 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_00649 | Not Available | - | 703900 - 707001 | 113992.0 |
| hypothetical protein | HMPREF1065_00650 | Not Available | - | 707036 - 707320 | 11160.2 |
| sigma-70 family rna polymerase sigma factor | HMPREF1065_00651 | Not Available | - | 707369 - 707923 | 21450.0 |
| hypothetical protein | HMPREF1065_00652 | Not Available | - | 708110 - 711196 | 115818.0 |
| hypothetical protein | HMPREF1065_00653 | Not Available | - | 711198 - 712880 | 61355.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

