Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybak/ebsc protein | HMPREF1065_00506 | Not Available | - | 535903 - 536388 | 17855.0 |
| excinuclease abc subunit a | HMPREF1065_00507 | Not Available | - | 536403 - 539231 | 105969.0 |
| hypothetical protein | HMPREF1065_00508 | Not Available | + | 539386 - 541194 | 68545.0 |
| hypothetical protein | HMPREF1065_00509 | Not Available | + | 541194 - 541877 | 25745.0 |
| hypothetical protein | HMPREF1065_00510 | Not Available | - | 541985 - 542437 | 16899.6 |
| hypothetical protein | HMPREF1065_00511 | Not Available | - | 542687 - 543022 | 12965.3 |
| outer membrane assembly lipoprotein yfio | HMPREF1065_00512 | Not Available | - | 543039 - 543875 | 32450.3 |
| uvrabc system protein b | HMPREF1065_00513 | Not Available | + | 544042 - 546075 | 77662.6 |
| hypothetical protein | HMPREF1065_00514 | Not Available | - | 546154 - 547167 | 38637.0 |
| hypothetical protein | HMPREF1065_00515 | Not Available | - | 547359 - 547961 | 22779.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

