Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00469 | Not Available | + | 492950 - 493510 | 20202.2 |
| hypothetical protein | HMPREF1065_00470 | Not Available | - | 493603 - 493722 | 4231.93 |
| precorrin-3b c17-methyltransferase | HMPREF1065_00471 | Not Available | + | 494189 - 495595 | 51842.8 |
| precorrin-6y c5,15-methyltransferase (decarboxylating), cbie subunit | HMPREF1065_00472 | Not Available | + | 495600 - 496781 | 44285.8 |
| precorrin-4 c11-methyltransferase | HMPREF1065_00473 | Not Available | + | 496803 - 498614 | 67137.4 |
| cobalamin biosynthesis protein cbid | HMPREF1065_00474 | Not Available | + | 498640 - 500436 | 66044.2 |
| hypothetical protein | HMPREF1065_00475 | Not Available | - | 500455 - 501477 | 37699.9 |
| hypothetical protein | HMPREF1065_00476 | Not Available | - | 501477 - 502514 | 36729.8 |
| hypothetical protein | HMPREF1065_00477 | Not Available | - | 502526 - 503677 | 43203.0 |
| precorrin-2 c20-methyltransferase | HMPREF1065_00478 | Not Available | + | 503781 - 504509 | 27531.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

