Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit beta | HMPREF1065_00459 | Not Available | + | 479227 - 480276 | 41386.9 |
| 5,10-methylenetetrahydrofolate reductase | HMPREF1065_00460 | Not Available | - | 480369 - 481322 | 35804.9 |
| hypothetical protein | HMPREF1065_00461 | Not Available | - | 481619 - 483922 | 85932.4 |
| hypothetical protein | HMPREF1065_00462 | Not Available | - | 484031 - 484411 | 13857.4 |
| hypothetical protein | HMPREF1065_00463 | Not Available | + | 484852 - 487029 | 81106.3 |
| hypothetical protein | HMPREF1065_00464 | Not Available | + | 487043 - 488200 | 43395.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF1065_00465 | Not Available | - | 488309 - 490069 | 64524.6 |
| hypothetical protein | HMPREF1065_00466 | Not Available | - | 490256 - 491143 | 34219.2 |
| hypothetical protein | HMPREF1065_00467 | Not Available | - | 491175 - 492083 | 35410.4 |
| hypothetical protein | HMPREF1065_00468 | Not Available | + | 492408 - 492944 | 19909.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

