Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase activating protein | HMPREF1065_00449 | Not Available | - | 469606 - 470073 | 17754.3 |
| anaerobic ribonucleoside-triphosphate reductase | HMPREF1065_00450 | Not Available | - | 470057 - 472150 | 80525.2 |
| hypothetical protein | HMPREF1065_00451 | Not Available | + | 472862 - 473113 | 9673.73 |
| hypothetical protein | HMPREF1065_00452 | Not Available | + | 473079 - 473395 | 11889.5 |
| hypothetical protein | HMPREF1065_00453 | Not Available | + | 473396 - 473515 | 4592.7 |
| aspt/yide/ybjl antiporter duplication domain-containing protein | HMPREF1065_00454 | Not Available | + | 473641 - 475329 | 60893.8 |
| hypothetical protein | HMPREF1065_00455 | Not Available | + | 475349 - 475906 | 21451.8 |
| hypothetical protein | HMPREF1065_00456 | Not Available | + | 475933 - 476142 | 7672.37 |
| ribonucleoside-diphosphate reductase, alpha subunit | HMPREF1065_00457 | Not Available | + | 476545 - 478635 | 79593.1 |
| ribonucleoside-diphosphate reductase subunit alpha | HMPREF1065_00458 | Not Available | + | 478669 - 479064 | 14806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

