Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HMPREF1065_04207 | Not Available | + | 5198940 - 5199599 | 24284.4 |
| atp-dependent dna helicase recg | HMPREF1065_04208 | Not Available | + | 5199601 - 5201697 | 79842.0 |
| nucleoside diphosphate kinase | HMPREF1065_04209 | Not Available | + | 5201919 - 5202383 | 17375.1 |
| hypothetical protein | HMPREF1065_04210 | Not Available | + | 5202404 - 5203291 | 33176.0 |
| hypothetical protein | HMPREF1065_04211 | Not Available | + | 5203405 - 5203947 | 20792.1 |
| hypothetical protein | HMPREF1065_04212 | Not Available | + | 5203994 - 5205238 | 47704.6 |
| triosephosphate isomerase | HMPREF1065_04213 | Not Available | + | 5205269 - 5206024 | 26903.2 |
| hypothetical protein | HMPREF1065_04214 | Not Available | + | 5206130 - 5206588 | 17078.7 |
| gtp cyclohydrolase 1 | HMPREF1065_04215 | Not Available | + | 5206593 - 5207186 | 22694.7 |
| dna primase | HMPREF1065_04216 | Not Available | - | 5207202 - 5209277 | 78739.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

