Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_04197 | Not Available | + | 5190908 - 5191132 | 8278.01 |
| hypothetical protein | HMPREF1065_04198 | Not Available | + | 5191190 - 5191438 | 9969.93 |
| hypothetical protein | HMPREF1065_04199 | Not Available | + | 5191596 - 5192048 | 17165.1 |
| hypothetical protein | HMPREF1065_04200 | Not Available | - | 5193157 - 5194467 | 49761.5 |
| hypothetical protein | HMPREF1065_04201 | Not Available | - | 5194639 - 5195526 | 32782.2 |
| pyridoxine 5'-phosphate synthase | HMPREF1065_04202 | Not Available | + | 5195630 - 5196346 | 26359.6 |
| hypothetical protein | HMPREF1065_04203 | Not Available | + | 5196343 - 5197059 | 25772.9 |
| hypothetical protein | HMPREF1065_04204 | Not Available | + | 5197066 - 5197485 | 16051.8 |
| tonb family domain-containing protein | HMPREF1065_04205 | Not Available | + | 5197495 - 5198388 | 31712.9 |
| dj-1 family protein | HMPREF1065_04206 | Not Available | + | 5198392 - 5198943 | 19240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

