Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_04187 | Not Available | + | 5170629 - 5173127 | 92515.7 |
| hypothetical protein | HMPREF1065_04188 | Not Available | + | 5173144 - 5175492 | 88354.7 |
| hypothetical protein | HMPREF1065_04189 | Not Available | + | 5175646 - 5178486 | 107962.0 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04190 | Not Available | + | 5178698 - 5181646 | 108879.0 |
| hypothetical protein | HMPREF1065_04191 | Not Available | + | 5181668 - 5183302 | 62543.5 |
| hypothetical protein | HMPREF1065_04192 | Not Available | + | 5183475 - 5185826 | 88912.2 |
| nuclease sbccd subunit d | HMPREF1065_04193 | Not Available | + | 5185856 - 5186017 | 6185.26 |
| exonuclease sbccd, d subunit | HMPREF1065_04194 | Not Available | + | 5185968 - 5187170 | 44921.7 |
| hypothetical protein | HMPREF1065_04195 | Not Available | + | 5187167 - 5190250 | 116638.0 |
| hypothetical protein | HMPREF1065_04196 | Not Available | + | 5190313 - 5190513 | 7721.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

