Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pbsx family phage terminase, large subunit | HMPREF1065_00392 | Not Available | - | 425943 - 427211 | 48091.9 |
| hypothetical protein | HMPREF1065_00393 | Not Available | - | 427208 - 427723 | 19344.8 |
| hypothetical protein | HMPREF1065_00394 | Not Available | - | 428126 - 428866 | 28137.3 |
| hypothetical protein | HMPREF1065_00395 | Not Available | - | 429075 - 429749 | 26635.8 |
| hypothetical protein | HMPREF1065_00396 | Not Available | - | 429952 - 430341 | 14760.7 |
| Trna-pseudo | Not Available | Not Available | + | 430371 - 430445 | Not Available |
| hypothetical protein | HMPREF1065_00397 | Not Available | - | 430517 - 430729 | 8337.96 |
| hypothetical protein | HMPREF1065_00398 | Not Available | - | 430733 - 431020 | 11270.6 |
| hypothetical protein | HMPREF1065_00399 | Not Available | - | 431013 - 431363 | 13570.2 |
| hypothetical protein | HMPREF1065_00400 | Not Available | - | 431376 - 431573 | 7367.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

