Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04177 | Not Available | - | 5151846 - 5154917 | 113256.0 |
| hypothetical protein | HMPREF1065_04178 | Not Available | - | 5155432 - 5155695 | 10174.3 |
| hypothetical protein | HMPREF1065_04179 | Not Available | - | 5155739 - 5157946 | 85215.8 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_04180 | Not Available | + | 5158150 - 5158710 | 22126.4 |
| hypothetical protein | HMPREF1065_04181 | Not Available | + | 5158784 - 5159728 | 36118.7 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04182 | Not Available | + | 5159879 - 5161882 | 73036.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04183 | Not Available | + | 5161886 - 5163265 | 50735.4 |
| hypothetical protein | HMPREF1065_04184 | Not Available | + | 5163287 - 5164759 | 54799.8 |
| hypothetical protein | HMPREF1065_04185 | Not Available | + | 5164886 - 5168404 | 132059.0 |
| hypothetical protein | HMPREF1065_04186 | Not Available | + | 5168658 - 5170601 | 73310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

