Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr00659 family protein | HMPREF1065_04157 | Not Available | + | 5116883 - 5117578 | 24452.1 |
| hypothetical protein | HMPREF1065_04158 | Not Available | + | 5117800 - 5118702 | 34455.5 |
| hypothetical protein | HMPREF1065_04159 | Not Available | + | 5118686 - 5119696 | 39000.1 |
| tigr00159 family protein | HMPREF1065_04160 | Not Available | - | 5119774 - 5120538 | 28478.5 |
| dihydropteroate synthase | HMPREF1065_04161 | Not Available | - | 5120570 - 5121427 | 31983.9 |
| udp-n-acetylmuramoyl-tripeptide-d-alanyl-d- alanine ligase | HMPREF1065_04162 | Not Available | + | 5121546 - 5122844 | 48271.1 |
| hypothetical protein | HMPREF1065_04163 | Not Available | + | 5123303 - 5124541 | 47946.4 |
| hypothetical protein | HMPREF1065_04164 | Not Available | + | 5124633 - 5126948 | 88951.2 |
| hypothetical protein | HMPREF1065_04165 | Not Available | + | 5127093 - 5128133 | 40907.8 |
| hypothetical protein | HMPREF1065_04166 | Not Available | - | 5128351 - 5132385 | 153377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

