Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04137 | Not Available | + | 5089098 - 5092319 | 117046.0 |
| hypothetical protein | HMPREF1065_04138 | Not Available | + | 5092348 - 5094183 | 68590.4 |
| hypothetical protein | HMPREF1065_04139 | Not Available | + | 5094391 - 5095974 | 61709.9 |
| hypothetical protein | HMPREF1065_04140 | Not Available | + | 5095992 - 5098307 | 87459.2 |
| hypothetical protein | HMPREF1065_04141 | Not Available | + | 5098316 - 5101375 | 116619.0 |
| hypothetical protein | HMPREF1065_04142 | Not Available | + | 5101393 - 5103252 | 69713.9 |
| hypothetical protein | HMPREF1065_04143 | Not Available | + | 5103502 - 5105898 | 90733.5 |
| hypothetical protein | HMPREF1065_04144 | Not Available | + | 5106304 - 5107026 | 27147.1 |
| hypothetical protein | HMPREF1065_04145 | Not Available | + | 5107080 - 5107253 | 6802.47 |
| hypothetical protein | HMPREF1065_04146 | Not Available | + | 5107265 - 5108410 | 42888.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

