Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_04127 | Not Available | - | 5076152 - 5076550 | 15093.2 |
| hypothetical protein | HMPREF1065_04128 | Not Available | - | 5076580 - 5077230 | 24839.7 |
| hypothetical protein | HMPREF1065_04129 | Not Available | - | 5077289 - 5078446 | 44582.6 |
| d-alanine-d-alanine ligase | HMPREF1065_04130 | Not Available | - | 5078550 - 5079524 | 36103.2 |
| rlua family pseudouridine synthase | HMPREF1065_04131 | Not Available | - | 5079521 - 5080594 | 40858.8 |
| hypothetical protein | HMPREF1065_04132 | Not Available | - | 5080613 - 5081254 | 23480.0 |
| hypothetical protein | HMPREF1065_04133 | Not Available | + | 5081404 - 5082750 | 50203.2 |
| hypothetical protein | HMPREF1065_04134 | Not Available | - | 5082855 - 5083100 | 9129.97 |
| hypothetical protein | HMPREF1065_04135 | Not Available | - | 5083366 - 5087298 | 149358.0 |
| hypothetical protein | HMPREF1065_04136 | Not Available | - | 5087431 - 5088816 | 51092.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

