Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_04107 | Not Available | - | 5039471 - 5041177 | 63984.9 |
| hypothetical protein | HMPREF1065_04108 | Not Available | - | 5041256 - 5041894 | 24248.7 |
| hypothetical protein | HMPREF1065_04109 | Not Available | + | 5041896 - 5042102 | 7990.83 |
| hypothetical protein | HMPREF1065_04110 | Not Available | + | 5042207 - 5043358 | 45245.6 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04111 | Not Available | + | 5043694 - 5047104 | 124819.0 |
| hypothetical protein | HMPREF1065_04112 | Not Available | + | 5047132 - 5049018 | 72152.2 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04113 | Not Available | + | 5049404 - 5052787 | 123355.0 |
| hypothetical protein | HMPREF1065_04114 | Not Available | + | 5052809 - 5054722 | 73231.6 |
| hypothetical protein | HMPREF1065_04115 | Not Available | + | 5055050 - 5056243 | 45823.4 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_04116 | Not Available | + | 5056358 - 5059489 | 116176.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

