Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_04059 | Not Available | - | 4974714 - 4975025 | 11712.1 |
| dna topoisomerase iii | HMPREF1065_04060 | Not Available | - | 4974976 - 4977117 | 79829.9 |
| hypothetical protein | HMPREF1065_04061 | Not Available | + | 4977390 - 4978256 | 33167.4 |
| hypothetical protein | HMPREF1065_04062 | Not Available | + | 4978491 - 4978865 | 12944.7 |
| hypothetical protein | HMPREF1065_04063 | Not Available | - | 4979053 - 4980945 | 72855.7 |
| aconitate hydratase | HMPREF1065_04064 | Not Available | + | 4981117 - 4983360 | 81199.9 |
| isocitrate dehydrogenase, nadp-dependent | HMPREF1065_04065 | Not Available | + | 4983364 - 4984509 | 41557.9 |
| hypothetical protein | HMPREF1065_04066 | Not Available | + | 4984522 - 4985865 | 51060.6 |
| hypothetical protein | HMPREF1065_04067 | Not Available | + | 4986846 - 4987610 | 29510.6 |
| hypothetical protein | HMPREF1065_04068 | Not Available | + | 4987670 - 4988896 | 45621.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

