Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase 2 | HMPREF1065_04040 | Not Available | - | 4959592 - 4960572 | 35428.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HMPREF1065_04041 | Not Available | - | 4960654 - 4961520 | 32599.1 |
| cytidylate kinase | HMPREF1065_04042 | Not Available | - | 4961513 - 4962202 | 25647.7 |
| tonb family domain-containing protein | HMPREF1065_04043 | Not Available | + | 4962389 - 4963072 | 25665.9 |
| hypothetical protein | HMPREF1065_04044 | Not Available | + | 4963154 - 4964131 | 37003.8 |
| tatd family hydrolase | HMPREF1065_04045 | Not Available | + | 4964133 - 4964906 | 29377.4 |
| Trna-ser | Not Available | Not Available | + | 4965076 - 4965163 | Not Available |
| hypothetical protein | HMPREF1065_04046 | Not Available | + | 4965252 - 4966025 | 27509.3 |
| hypothetical protein | HMPREF1065_04047 | Not Available | + | 4966034 - 4966492 | 16541.8 |
| hypothetical protein | HMPREF1065_04048 | Not Available | + | 4966538 - 4967128 | 22530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

