Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_04030 | Not Available | + | 4945520 - 4946524 | 37339.8 |
| aminoacyl-histidine dipeptidase | HMPREF1065_04031 | Not Available | + | 4946521 - 4947981 | 53245.7 |
| hypothetical protein | HMPREF1065_04032 | Not Available | - | 4948043 - 4948510 | 17023.3 |
| y4mf family transcriptional regulator | HMPREF1065_04033 | Not Available | + | 4949425 - 4949640 | 7822.62 |
| hipa domain-containing protein | HMPREF1065_04034 | Not Available | + | 4949637 - 4949972 | 12521.0 |
| hypothetical protein | HMPREF1065_04035 | Not Available | + | 4949972 - 4950910 | 35884.8 |
| hypothetical protein | HMPREF1065_04036 | Not Available | + | 4951023 - 4956701 | 213579.0 |
| hypothetical protein | HMPREF1065_04037 | Not Available | - | 4956757 - 4957194 | 17241.1 |
| hypothetical protein | HMPREF1065_04038 | Not Available | + | 4957325 - 4958401 | 39302.2 |
| lao/ao transport system atpase | HMPREF1065_04039 | Not Available | + | 4958404 - 4959501 | 40361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

