Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase sure | HMPREF1065_04021 | Not Available | + | 4934347 - 4935120 | 28374.8 |
| lipid-a-disaccharide synthase | HMPREF1065_04022 | Not Available | + | 4935117 - 4936256 | 42983.6 |
| hypothetical protein | HMPREF1065_04023 | Not Available | + | 4936312 - 4937046 | 27440.8 |
| hypothetical protein | HMPREF1065_04024 | Not Available | - | 4937038 - 4937877 | 30836.3 |
| atp-dependent metallopeptidase hflb | HMPREF1065_04025 | Not Available | - | 4938029 - 4939999 | 73302.6 |
| iojap-like ribosome-associated protein | HMPREF1065_04026 | Not Available | - | 4940053 - 4940412 | 13423.9 |
| Trna-gln | Not Available | Not Available | + | 4940732 - 4940802 | Not Available |
| hypothetical protein | HMPREF1065_04027 | Not Available | - | 4941137 - 4942945 | 70174.0 |
| magnesium transporter | HMPREF1065_04028 | Not Available | - | 4943207 - 4944547 | 49694.8 |
| ribosomal rna small subunit methyltransferase a | HMPREF1065_04029 | Not Available | - | 4944579 - 4945421 | 31917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

