Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol-serine o-phosphatidyltransferase | HMPREF1065_03982 | Not Available | - | 4889138 - 4889845 | 26116.5 |
| phosphatidylserine decarboxylase proenzyme | HMPREF1065_03983 | Not Available | - | 4889857 - 4890543 | 25926.1 |
| dna polymerase iii, alpha subunit | HMPREF1065_03984 | Not Available | + | 4890735 - 4894532 | 143936.0 |
| thioredoxin | HMPREF1065_03985 | Not Available | + | 4894574 - 4894888 | 11454.8 |
| hypothetical protein | HMPREF1065_03986 | Not Available | + | 4894923 - 4895258 | 12877.8 |
| hypothetical protein | HMPREF1065_03987 | Not Available | + | 4895436 - 4896995 | 60964.2 |
| hypothetical protein | HMPREF1065_03988 | Not Available | - | 4897109 - 4897324 | 8124.18 |
| yjee family atpase | HMPREF1065_03989 | Not Available | - | 4897391 - 4897819 | 16216.2 |
| hypothetical protein | HMPREF1065_03990 | Not Available | - | 4897803 - 4898654 | 31359.5 |
| hypothetical protein | HMPREF1065_03991 | Not Available | - | 4898715 - 4899134 | 15904.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

