Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03972 | Not Available | - | 4881387 - 4882625 | 47110.1 |
| uridylate kinase | HMPREF1065_03973 | Not Available | - | 4882883 - 4883593 | 25575.2 |
| mate efflux family protein | HMPREF1065_03974 | Not Available | - | 4883632 - 4885011 | 51068.3 |
| hypothetical protein | HMPREF1065_03975 | Not Available | + | 4885114 - 4886553 | 54016.5 |
| biotin-[acetyl-coa-carboxylase] ligase | HMPREF1065_03976 | Not Available | - | 4886550 - 4887317 | 29318.1 |
| hypothetical protein | HMPREF1065_03977 | Not Available | - | 4887301 - 4887657 | 14020.0 |
| hypothetical protein | HMPREF1065_03978 | Not Available | - | 4887675 - 4888040 | 14151.9 |
| hypothetical protein | HMPREF1065_03979 | Not Available | + | 4888074 - 4888349 | 11043.6 |
| hypothetical protein | HMPREF1065_03980 | Not Available | + | 4888351 - 4888785 | 15697.1 |
| hypothetical protein | HMPREF1065_03981 | Not Available | - | 4888789 - 4889085 | 11342.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

