Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03962 | Not Available | - | 4866691 - 4868010 | 50543.6 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF1065_03963 | Not Available | - | 4868007 - 4871042 | 112070.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_03964 | Not Available | - | 4871062 - 4872138 | 39672.1 |
| hypothetical protein | HMPREF1065_03965 | Not Available | - | 4872225 - 4873247 | 38392.9 |
| ribosome small subunit-dependent gtpase a | HMPREF1065_03966 | Not Available | - | 4873261 - 4874193 | 35100.9 |
| hypothetical protein | HMPREF1065_03967 | Not Available | + | 4874216 - 4874305 | 3289.96 |
| ribosome-recycling factor | HMPREF1065_03968 | Not Available | - | 4874314 - 4874874 | 20738.2 |
| hypothetical protein | HMPREF1065_03969 | Not Available | + | 4875401 - 4875919 | 19609.7 |
| hypothetical protein | HMPREF1065_03970 | Not Available | - | 4875942 - 4879199 | 121281.0 |
| hypothetical protein | HMPREF1065_03971 | Not Available | - | 4879224 - 4881332 | 79959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

