Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase, class i | HMPREF1065_03942 | Not Available | - | 4828186 - 4829157 | 36202.5 |
| hypothetical protein | HMPREF1065_03943 | Not Available | - | 4829273 - 4830850 | 56725.7 |
| tonb-dependent receptor | HMPREF1065_03944 | Not Available | - | 4830887 - 4833652 | 104524.0 |
| hypothetical protein | HMPREF1065_03945 | Not Available | + | 4833818 - 4834834 | 37895.5 |
| hypothetical protein | HMPREF1065_03946 | Not Available | - | 4835951 - 4836739 | 28533.5 |
| hypothetical protein | HMPREF1065_03947 | Not Available | - | 4836764 - 4838305 | 57146.1 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03948 | Not Available | - | 4838330 - 4841506 | 117121.0 |
| hypothetical protein | HMPREF1065_03949 | Not Available | + | 4841814 - 4841927 | 4720.85 |
| hypothetical protein | HMPREF1065_03950 | Not Available | + | 4841875 - 4843035 | 44985.7 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03951 | Not Available | + | 4844496 - 4847357 | 106170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

