Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03933 | Not Available | Positive | 4809528 - 4810934 | 52455.7 |
| hypothetical protein | HMPREF1065_03934 | Not Available | Negative | 4811012 - 4814719 | 142177.0 |
| hypothetical protein | HMPREF1065_03935 | Not Available | Negative | 4814750 - 4815484 | 28480.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03936 | Not Available | Positive | 4815582 - 4818830 | 120336.0 |
| hypothetical protein | HMPREF1065_03937 | Not Available | Positive | 4818843 - 4820561 | 64244.0 |
| hypothetical protein | HMPREF1065_03938 | Not Available | Positive | 4820578 - 4823445 | 108298.0 |
| hypothetical protein | HMPREF1065_03939 | Not Available | Negative | 4823517 - 4824740 | 46659.1 |
| hypothetical protein | HMPREF1065_03940 | Not Available | Positive | 4824890 - 4826215 | 50401.0 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 4826394 - 4826788 | Not Available |
| hypothetical protein | HMPREF1065_03941 | Not Available | Positive | 4826929 - 4828095 | 42752.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

