Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03913 | Not Available | - | 4789759 - 4790745 | 38583.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF1065_03914 | Not Available | + | 4790802 - 4792736 | 71792.0 |
| hypothetical protein | HMPREF1065_03915 | Not Available | + | 4792749 - 4794089 | 49250.4 |
| trkh family potassium uptake protein | HMPREF1065_03916 | Not Available | + | 4794089 - 4795543 | 53574.4 |
| hypothetical protein | HMPREF1065_03917 | Not Available | + | 4795647 - 4796024 | 14727.8 |
| nadh-quinone oxidoreductase subunit a | HMPREF1065_03918 | Not Available | + | 4796128 - 4796478 | 13099.5 |
| nadh-quinone oxidoreductase subunit b | HMPREF1065_03919 | Not Available | + | 4796469 - 4797065 | 22111.0 |
| nadh-quinone oxidoreductase subunit c/d | HMPREF1065_03920 | Not Available | + | 4797062 - 4798621 | 59780.7 |
| nadh-quinone oxidoreductase subunit h | HMPREF1065_03921 | Not Available | + | 4798745 - 4799821 | 40265.7 |
| nadh-quinone oxidoreductase, chain i | HMPREF1065_03922 | Not Available | + | 4799821 - 4800273 | 16944.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

